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Establishing CRISPR-Cas9 and BioID Workflows to Probe Molecular Signaling Pathways in Kidney Podocytes

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dc.contributor.advisor Jones, Nina
dc.contributor.author Phippen, Noah
dc.date.accessioned 2021-09-08T12:03:03Z
dc.date.copyright 2021-09-01
dc.date.created 2021-09-01
dc.identifier.uri https://hdl.handle.net/10214/26359
dc.description.abstract Podocyte detachment is a significant contributor to kidney disease progression, involving changes in signaling proteins which control integrin activity. Integrins are a major component of focal adhesions, and their activity is negatively regulated by the adaptor proteins Dok1 and Dok2. We uncovered a protective effect of Dok1 and Dok2 loss during podocyte injury in vivo, and as such, the goal of this thesis was to implement two new in vitro methodologies to better understand the role of Dok proteins in podocytes. Herein, we outline the development of workflows suited to the generation of CRISPR-Cas9 knockout (KO) podocytes as well as stable expressing bait-miniTurbo podocyte cell lines for proximity-dependent biotin identification (BioID). Dok1/2 CRISPR KO podocytes revealed a modest cell adhesion phenotype as well as increased cell migration. Cellular component gene ontology analysis of Dok1 and Dok2 proximity interactors revealed association of Dok proteins to adhesive junctions. en_US
dc.description.sponsorship Kidney Foundation en_US
dc.language.iso en en_US
dc.publisher University of Guelph en_US
dc.subject CRISPR en_US
dc.subject Podocyte en_US
dc.subject BioID en_US
dc.subject Dok1 en_US
dc.subject Dok2 en_US
dc.title Establishing CRISPR-Cas9 and BioID Workflows to Probe Molecular Signaling Pathways in Kidney Podocytes en_US
dc.type Thesis en_US
dc.degree.programme Molecular and Cellular Biology en_US
dc.degree.name Master of Science en_US
dc.degree.department Department of Molecular and Cellular Biology en_US
dc.description.embargo 2022-09-01
dc.rights.license All items in the Atrium are protected by copyright with all rights reserved unless otherwise indicated.
dc.degree.grantor University of Guelph en_US


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